Difference between revisions of "SUIT-032 O2 mt D109"
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|description=[[File:Mt;1PGM;2D;3Myx.png|300 px]] | |||
|info='''A''': protocol for determination of O<sub><small>2</small></sub> flux in mitochondrial preparations (isolated mitochondria, tissue homogenate and permeabilized cells)- '''[[SUIT-032]]''' | |||
|application=O2 | |||
|SUIT number=D109_mt;1PGM;2D;3Myx | |||
}} | |||
{{Template:SUIT text D109}} | |||
__TOC__ | |||
Communicated by [[Grings M]], [[Cardoso Luiza HD]] (last update 2024-01-12) | |||
== Representative traces == | |||
[[File:SUIT-032 O2 mt D109 O2.png|600px]] | |||
{{Template:SUIT-032 O2 mt D109}} | |||
== Strengths and limitations == | |||
:::* Control protocol of [[SUIT-032 NADH mt D078]] for respiration only, allowing for cytochrome ''c'' test. | |||
:::+ Reasonable duration of the experiment. | |||
:::- Careful washing is required after the experiment to avoid carry-over of inhibitors. The addition of liver homogenate is recommended in the washing protocol to bind strong inhibitors. | |||
:::* After myxothyazol titration, this protocol can be extended with the [[Complex IV]] assay. | |||
== Compare SUIT protocols == | |||
:::* [[SUIT-032 NADH mt D078]]: Similar protocol to perform simultaneous determination of O<sub><small>2</small></sub> flux and NADH autofluorescence in isolated mitochondria. | |||
== Chemicals and syringes == | |||
{{Template:Chemical SUIT-032 O2 mt D109}} | |||
::: Suggested stock concentrations are shown in the specific DL-Protocol. | |||
== References == | |||
{{#ask:[[Category:Publications]] [[Additional label::SUIT-032 O2 mt D109]] [[Instrument and method::O2k-Protocol]] | |||
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Latest revision as of 09:56, 26 January 2024
Description
Reference: A: protocol for determination of O2 flux in mitochondrial preparations (isolated mitochondria, tissue homogenate and permeabilized cells)- SUIT-032
SUIT number: D109_mt;1PGM;2D;3Myx
O2k-Application: O2
The coupling-control protocol SUIT-032 O2 mt D109 is used as a control protocol for SUIT-032 NADH mt D078, allowing for cytochrome c test and the evaluation of mitochondrial respiration in two coupling control states: LEAK, and OXPHOS in the N-pathway
After the addition of mitochondria in the absence of fuel substrates and ADP, Ren, respiration due to oxidation of endogenous substrates remaining after mitochondrial isolation is measured.
The addition of the complex III inhibitor myxothiazol allows the measurement of Rox.
Communicated by Grings M, Cardoso Luiza HD (last update 2024-01-12)
Representative traces
Steps and respiratory states
Step | State | Pathway | Q-junction | Comment - Events (E) and Marks (M) |
---|---|---|---|---|
mt | REN | mt
| ||
1PGM | PGML(n) | N | CI | 1PGM
|
2D | PGMP | N | CI | 1PGM;2D
|
3Myx | ROX | 1PGM;2D;3Myx
|
- Bioblast links: SUIT protocols - >>>>>>> - Click on [Expand] or [Collapse] - >>>>>>>
- Coupling control
- Pathway control
- Main fuel substrates
- » Glutamate, G
- » Glycerophosphate, Gp
- » Malate, M
- » Octanoylcarnitine, Oct
- » Pyruvate, P
- » Succinate, S
- Main fuel substrates
- Glossary
Strengths and limitations
- Control protocol of SUIT-032 NADH mt D078 for respiration only, allowing for cytochrome c test.
- + Reasonable duration of the experiment.
- - Careful washing is required after the experiment to avoid carry-over of inhibitors. The addition of liver homogenate is recommended in the washing protocol to bind strong inhibitors.
- After myxothyazol titration, this protocol can be extended with the Complex IV assay.
Compare SUIT protocols
- SUIT-032 NADH mt D078: Similar protocol to perform simultaneous determination of O2 flux and NADH autofluorescence in isolated mitochondria.
Chemicals and syringes
If the experiment is performed as a control for D078, we recommend using the same chemicals.
Step | Chemical(s) and link(s) | Comments |
---|---|---|
1PGM | Pyruvate (P), Glutamate (G), and Malate (M) | |
2D | ADP (D) | |
3Myx | Myxothiazol |
- Suggested stock concentrations are shown in the specific DL-Protocol.