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List of results
- SUIT-018 AmR mt D040 + ('''A''': simultaneous determination of O<sub>2</sub> and H<sub>2</sub>O<sub>2</sub> flux in mitochondrial preparations (isolated mitochondria, tissue homogenate and permeabilized cells)-'''[[SUIT-018]]''')
- SUIT-005 O2 pfi D011 + ('''A''': - '''[[SUIT-005]]''' short protocol linked to [[SUIT-002 O2 pfi D006]] - '''SUIT RP2''' (human skeletal muscle))
- SUIT-020 Fluo mt D033 + ('''A''':short protocol for simultaneous determination of O<sub>2</sub> flux and mitochondrial membrane potential in mitochondrial preparations (isolated mitochondria, permeabilized cells, and tissue homogenate)- '''[[SUIT-020]]''')
- SUIT-021 O2 mt D035 + ('''A''':short protocol for simultaneous determination of O<sub>2</sub> flux and mitochondrial membrane potential in mitochondrial preparations (isolated mitochondria, permabilized cells, and tissue homogenate)-'''[[SUIT-021]]''')
- SUIT-019 + ('''A:)
- SUIT-008 O2 mt D026 + ('''A: SUIT protocol for mt; mt: isolated mitochondria and tissue homogenate - '''[[SUIT-008]]''')
- SUIT-015 + ('''A: [[Fatty_acid_oxidation_pathway_control_state|F-pathway]] in [[LEAK respiration#The_LEAK_state |LEAK state]] and [[Oxidative phosphorylation|OXPHOS state]]''')
- SUIT-008 O2 ce-pce D025 + ('''A: for cells-permeabilized cells''' [[Lemieux 2017 Sci Rep]] - '''[[SUIT-008]]''')
- SUIT-031 + ('''A: ''')
- SUIT-018 + ('''A: A protocol for oxygen dependence of O<sub>2</sub> flux and H<sub>2</sub>O<sub>2</sub> flux in isolated mitochondria,tissue homogenate or permeabilized cells''')
- SUIT-008 + ('''A: Additivity between the N- and [[Succinate pathway control state| S-pathway]] in the Q-junction''')
- SUIT-014 + ('''A: Cells or tissue types that display a preference for [[GM_pathway_control_state |GM]] over [[PM_pathway_control_state |PM]] to support NADH-linked respiration''')
- SUIT-012 + ('''A: Coupling control ([[LEAK respiration|''L'']]-[[Oxidative phosphorylation| ''P'']]-[[ET capacity| ''E'']]) with NADH-linked substrates ([[PM-pathway control state|PM]] and PGM)''')
- SUIT-024 + ('''A: Determination of ATPase activity in [[mitochondrial preparations]].)
- SUIT-023 + ('''A: Determination of respiration through the CIII-CIV pathway''')
- SUIT-022 + ('''A: Determination of the respiration due to the alternative oxidase pathway''')
- SUIT-011 + ('''A: Maximum mitochondrial respiratory capacity ([[Oxidative phosphorylation|OXPHOS]] with [[NS-pathway control state|NS substrates]]) and coupling/pathway control''')
- SUIT-006 + ('''A: [[Coupling-control protocol]], [[Mitochondrial preparations |mtprep]]''')
- SUIT-033 + ('''A: [[Coupling-control protocol]], [[Mitochondrial preparations |mtprep]]''')
- SUIT-003 + ('''A: [[Coupling-control protocol]], [[living cells]]''' Ā»[http://wiki.oroboros.at/images/d/da/MiPNet08.09_CellRespiration.pdf MiPNet08.09 CellRespiration Bioblast pdf])
- SUIT-016 + ('''A: [[Fatty_acid_oxidation_pathway_control_state|F-pathway]] in [[LEAK respiration#The_LEAK_state |LEAK state]] and [[Oxidative phosphorylation|OXPHOS state]]''')
- SUIT-029 O2 mt D066 + ('''A: quality control evaluation of [[mitochondrial preparations]]''' - '''[[SUIT-029]]''')
- SUIT-021 + ('''A: simultaneous determination of O2 flux and mt-membrane potential''')
- SUIT-020 + ('''A: simultaneous determination of O2 flux and mt-membrane potential''')
- SUIT-017 + ('''A:''')
- SUIT-010 + ('''A:''' '''Optimization of [[digitonin]] concentration for [[permeabilized cells |pce]]''')
- SUIT-007 + ('''A:''' '''[[Glutamate-anaplerotic pathway control state|Glutamate anaplerotic pathway]]''')
- SUIT-027 + ('''A:''' '''[[Malate-anaplerotic pathway control state|Malate anaplerotic pathway]]''')
- SUIT-017 O2 mt D046 + ('''A:''' '''[[SUIT-017]]''')
- SUIT-017 O2 pfi D049 + ('''A:''' '''[[SUIT-017]]''')
- SUIT-003 O2 ce D009 + ('''A:''' - '''[[SUIT-003]]''' - [[Coupling-control protocol]] (CCP) in living cells (ce) with oligomycin (LEAK state))
- SUIT-003 O2 ce D050 + ('''A:''' - [[Coupling-control protocol]] ā¦ '''A:''' - [[Coupling-control protocol]] for [[living cells]] with plasma membrane-permeable succinate ([[MitoKit-CII/Succinate-nv]]) - '''[[SUIT-003]]''' - Plasma membrane-permeable succinate (NV118) in ROUTINE respiration. [[Coupling-control protocol]] (CCP) in living cells (ce)[[Coupling-control protocol]] (CCP) in living cells (ce))
- SUIT-003 O2 ce D062 + ('''A:''' Carrier control for the [[Coupling-control protocol]] for [[living cells]] with plasma membrane-permeable succinate ([[MitoKit-CII/Succinate-nv]]) - [[SUIT-003 O2 ce D050]])
- SUIT-003 O2 ce D039 + ('''A:''' Coupling control in intact cells without oligomycin; ce: non-permeabilized cells -'''[[SUIT-003]]''')
- SUIT-002 + ('''A:''' [[Doerrier 2018 Methods Mol Biol]])
- SUIT-005 + ('''A:''' when [[Malate-anaplerotic pathway control state |malate-anaplerotic activity]] is zero)
- SUIT-009 + ('''B''')
- SUIT-003 Ce1;ce2U;ce3Rot;ce4S;ce5Ama + ('''B''' '''[[SUIT-003]]''' CCP(S))
- SUIT-003 Ce1;ce1SD;ce3U;ce4Rot;ce5Ama + ('''B''' '''[[SUIT-003]]''' CCP(S))
- SUIT-003 Ce1;ce3U;ce4Rot;ce5S;ce6Ama + ('''B''' '''[[SUIT-003]]''' CCP(S))
- SUIT-003 O2 ce D028 + ('''B''' '''[[SUIT-003]]''' [[Coupling-control protocol]] with succinate for permeability test)
- SUIT-003 Ce1;ce2SD;ce3Omy;ce4U- + ('''B''' '''[[SUIT-003]]''' [[Stadlmann 2006 Cell Biochem Biophys]])
- SUIT-003 Ce1;ce1SD;ce2Omy;ce3U- + ('''B''' '''[[SUIT-003]]''' [[Stadlmann 2006 Cell Biochem Biophys]])
- SUIT-009 O2 ce-pce D016 + ('''B''' - '''[[SUIT-009]]''' - short protocol for mt-respiration in ce: non-permeabilized cells, pce: permeabilized cells.)
- SUIT-009 O2 mt D015 + ('''B''' - '''[[SUIT-009]]'''- short protocol for respiration in mitochondrial preparations; mt: isolated mitochondria, tissue homogenate and permeabilized cells)
- SUIT-026 O2 mt D063 + ('''B''' - '''[[SUIT-026]]''' - Protocol for the respiratory control of [[SUIT-026 AmR mt D064]])
- SUIT-026 O2 ce-pce D088 + ('''B''' - '''[[SUIT-026]]''' - Protocol for the respiratory control of [[SUIT-026 AmR ce-pce D087]])
- SUIT-003 O2 ce D012 + ('''B''' - [[SUIT-003]])
- SUIT-003 O2 ce D060 + ('''B''' - [[coupling-control protocol]] ā¦ '''B''' - [[coupling-control protocol]] for [[living cells]] with cell permeable compounds [[MitoKit-CII/Succinate-nv]] and [[MitoKit-CII/Malonate-nv]] -'''[[SUIT-003]]''' - Coupling-control protocol (CCP) with plasma membrane-permeable succinate ([[MitoKit-CII/Succinate-nv]]) and plasma membrane-permeable malonate ([[MitoKit-CII/Malonate-nv]]) in living cells (ce).[[MitoKit-CII/Malonate-nv]]) in living cells (ce).)
- SUIT-003 O2 ce D061 + ('''B''' Carrier control for the [[coupling-control protocol]] for [[living cells]] with cell permeable compounds [[MitoKit-CII/Succinate-nv]] and [[MitoKit-CII/Malonate-nv]] - [[SUIT-003 O2 ce D060]])
- 1PM;2D;3G;4U;5S;6Rot- + ('''B''' [[Lemieux 2011 Int J Biochem Cell Biol]])
- SUIT-003 Ce1;ce2SD;ce3U;ce4Rot;ce5Ama + ('''B''' [[Steinlechner-Maran 1997 Transplantation]])
- SUIT-009 AmR mt D021 + ('''B''': short protocol for H<sub>2 ā¦ '''B''': short protocol for H<sub>2</sub>O<sub>2</sub> (AmR) in mitochondrial preparations; mt: isolated mitochondria, tissue homogenate and permeabilized cells - '''[[SUIT-009]]'''short protocol for H<sub>2</sub>O<sub>2</sub> (AmR) for isolated mitochondria, tissue homogenate and permeabilized cellst;2</sub> (AmR) for isolated mitochondria, tissue homogenate and permeabilized cells)
- SUIT-009 AmR ce-pce D019 + ('''B''': short protocol for H<sub>2</sub>O<sub>2</sub> (AmR) in ce: non-permeabilized cells, pce: permeabilized cells -'''[[SUIT-009]]''')
- SUIT-018 O2 mt D054 + ('''B''': '''[[SUIT-018]]''')
- SUIT-003 AmR ce D017 + ('''B''': CCP(P) and cell membrane permeability test with succinate - [[SUIT-003]])
- SUIT-003 Ce1;ce2U- + ('''B''': Coupling Control General protocol [[SUIT-003]] [[Steinlechner-Maran_1996_Am J Physiol Cell Physiol]])
- SUIT-003 Ce1;ce3U- + ('''B''': Coupling Control General protocol [[SUIT-003]] [[Steinlechner-Maran_1996_Am J Physiol Cell Physiol]])
- SUIT-008 O2 pce D25 + ('''B: SUIT 8 for permeabilized cells''' [[Lemieux 2017 Sci Rep]])
- SUIT-003 AmR ce D058 + ('''B:''' Coupling control in intact cells with oligomycin to study the inhibitory effect of the AmR assay components on the respiration ; ce: non-permeabilized cells -'''[[SUIT-003]]''')
- SUIT-003 AmR ce D059 + ('''B:''' Experimental control for [[SUIT-003 AmR ce D058]])
- 1PGM;2D;3S;4Rot;5U- + ('''C''')
- SUIT-003 Ce1;ce1P;ce3U;ce4Glc;ce5M;ce6Rot;ce7S;1Dig;1c;2Ama;3AsTm;4Azd + ('''C''' '''[[SUIT-003]]''' Coupling-control protocol and respirometric cell viability test (CCV protocol) without oligomycin.)
- SUIT-003 O2 ce-pce D018 + ('''C''' '''[[SUIT-003]]''' Second version of the Coupling-control protocol and respirometric cell viability test '''(CCV protocol)''')
- SUIT-003 O2 ce-pce D013 + ('''C''' - '''[[SUIT-003]]''')
- 1OctM;2D;3PG;4S;5U;6Rot- + ('''C''' [[MiPNet18.13 IOC84 Alaska]])
- 1PGM;2D;3U;4S;5Rot- + ('''C''' [[MiPNet18.13 IOC84 Alaska]])
- SUIT-028 + ('''C''' [[MiPNet18.13 IOC84 Alaska]])
- O2k-Main Power Cable + ('''Product details and purchase informatio ā¦ '''Product details and purchase information''' - [https://www.oroboros.at/index.php/product/o2k-main-power-cable230-veurope/ O2k-Main Power Cable\230 V\Europe], [https://www.oroboros.at/index.php/product/o2k-main-power-cable120-vus-ca/ O2k-Main Power Cable\120 V\US-CA], or [https://www.oroboros.at/index.php/product/o2k-main-power-cable230-vau-nz/ O2k-Main Power Cable\230 V\AU-NZ]-vau-nz/ O2k-Main Power Cable\230 V\AU-NZ])
- PB Light Source + ('''Product details and purchase informatio ā¦ '''Product details and purchase information''' - [https://www.oroboros.at/index.php/product/pb-light-source-blue/ PB Light Source, blue], [https://www.oroboros.at/index.php/product/pb-light-source-red/ PB Light Source, red], [https://www.oroboros.at/index.php/product/pb-light-source-white/PB Light Source, white]light-source-white/PB Light Source, white])
- O2k-chamber + ('''Product details and purchase information''' - [https://www.oroboros.at/index.php/product/o2k-chamber/ O2k-Chamber (2.0 mL)], [https://www.oroboros.at/index.php/product/o2k-chamber-sv/ O2k-Chamber sV (0.5 mL)])
- Shredder-Tubes + ('''Product details and purchase information''' - [https://www.oroboros.at/index.php/product/shredder-tube-ft500-pms/ Shredder Tube FT500-PMS],[https://www.oroboros.at/index.php/product/shredder-tube-ft500-ps/ Shredder Tube FT500-PS],)
- Polishing Powder + ('''Product details and purchase information''' - [https://www.oroboros.at/index.php/product/orobopos-polishing-powder/ Polishing Powder 0.3 Āµm], [https://www.oroboros.at/index.php/product/polishing-powder-0-05/ Polishing Powder 0.05 Āµm])
- SUIT-004 O2 pfi D010 + ('''[[SUIT-004]]''' - Short protocol linked to [[SUIT-001 O2 pfi D002]] '''SUIT RP1''' (human skeletal muscle))
- Reverse electron flow from CII to CI + ( * <div>[https://wiki.oroboros.at/in ā¦ </br>* <div>[https://wiki.oroboros.at/index.php/Gnaiger_2012_MitoPathways Gnaiger 2012 MitoPathways]</div></br>* [https://wiki.oroboros.at/index.php/Komlodi_2018_J_Bioenerg_Biomembr Komlodi_2018_J_Bioenerg_Biomembr]</br>* [https://wiki.oroboros.at/index.php/Makrecka-Kuka_2015_Biomolecules Makrecka-Kuka_2015_Biomolecules]</br></br>* [https://wiki.oroboros.at/index.php/Tretter_2012_Free_Radic_Biol_Med Tretter_2012_Free_Radic_Biol_Med]</br>* [https://onlinelibrary.wiley.com/doi/full/10.1111/j.1471-4159.2006.04223.x Tretter_2006_J_Neurochem]</br></br>* [[Amplex UltraRed]]</br>[[Amplex UltraRed]] )
- Pressure + ( * Gnaiger E (2020) Mitochondrial pathways ā¦ </br>* Gnaiger E (2020) Mitochondrial pathways and respiratory control. An introduction to OXPHOS analysis. 5<sup>th</sup> ed. https://doi.org/10.26124/bec:2020-0002</br>* Gnaiger E (1989) Mitochondrial respiratory control: energetics, kinetics and efficiency. In: Energy transformations in cells and organisms. Wieser W, Gnaiger E (eds), Thieme, Stuttgart:6-17. - [[Gnaiger 1989 Energy Transformations |Ā»Bioblast linkĀ«]]</br>[[Gnaiger 1989 Energy Transformations |Ā»Bioblast linkĀ«]] )
- Free activity + ( * Gnaiger E (2020) Mitochondrial pathways ā¦ </br>* Gnaiger E (2020) Mitochondrial pathways and respiratory control. An introduction to OXPHOS analysis. 5<sup>th</sup> ed. https://doi.org/10.26124/bec:2020-0002</br>* Gnaiger E (1989) Mitochondrial respiratory control: energetics, kinetics and efficiency. In: Energy transformations in cells and organisms. Wieser W, Gnaiger E (eds), Thieme, Stuttgart:6-17. - [[Gnaiger 1989 Energy Transformations |Ā»Bioblast linkĀ«]]</br>[[Gnaiger 1989 Energy Transformations |Ā»Bioblast linkĀ«]] )
- Partial oxygen pressure + ( * Gnaiger E (2020) Mitochondrial pathways and respiratory control. An introduction to OXPHOS analysis. 5<sup>th</sup> ed. https://doi.org/10.26124/bec:2020-0002 )
- Units in figures and tables + ( * [[Bureau International des Poids et Mesures 2019 The International System of Units (SI)| Bureau International des Poids et Mesures (2019) The International System of Units (SI). 9th edition:117-216. ISBN 978-92-822-2272-0]] ā¦ </br>* [[Bureau International des Poids et Mesures 2019 The International System of Units (SI)| Bureau International des Poids et Mesures (2019) The International System of Units (SI). 9th edition:117-216. ISBN 978-92-822-2272-0]] </br>* Gnaiger E (2021) The elementary unit ā canonical reviewer's comments on: Bureau International des Poids et Mesures (2019) The International System of Units (SI) 9th ed. https://doi.org/10.26124/mitofit:200004.v2</br> https://doi.org/10.26124/mitofit:200004.v2 )
- Reproducibility crisis + ( ::1. Ioannidis JPA (2005) Why most publis ā¦ </br>::1. Ioannidis JPA (2005) Why most published research findings are false. PLoS Med 2:e124. https://doi.org/10.1371/journal.pmed.0020124</br>::2. Stanley EL (2016) Experimental design for laboratory biologists. Maximizing information and improving reproducibility. Cambridge University Press.</br>::3. [https://www.nature.com/news/1-500-scientists-lift-the-lid-on-reproducibility-1.19970 Baker M (2016) 1,500 scientists lift the lid on reproducibility. Survey sheds light on the ācrisisā rocking research. Nature 533:452ā4.]</br>risisā rocking research. Nature 533:452ā4.] )
- Chloroplasts + ( :::: )
- Mitochondria + ( :::: Gnaiger Erich et al ā MitoEAGLE Task Group (2020) Mitochondrial physiology. Bioenerg Commun 2020.1. doi:10.26124/bec:2020-0001.v1. - [[BEC 2020.1 doi10.26124bec2020-0001.v1 |Ā»BEC 2020.1Ā«]] )
- Photorespiration + ( :::: Stern K (2003) Introductory plant biology. McGraw-Hill, New York. ISBN 978-0-07-290941-8. )
- Photosynthesis + ( ::::Stern K (2003) Introductory plant biology. McGraw-Hill, New York. ISBN 978-0-07-290941-8. )
- Energy saving in research + (<br> [1] Meadows DH, Meadows DL, Ran ā¦ <br></br>[1] Meadows DH, Meadows DL, Randers J, Behrens III WW (1972) The limits to growth; a report for the Club of Rome's project on the predicament of mankind. ISBN 0876631650 - [[Meadows 1972 Universe Books |Ā»Bioblast linkĀ«]] <br></br>[2] Gnaiger E (2021) Beyond counting papers ā a mission and vision for scientific publication. https://doi.org/10.26124/bec:2021-0005ic publication. https://doi.org/10.26124/bec:2021-0005)
- Heat + (<u>Energy</u>)
- Internal-energy + (<u>[[Energy]]</u>)
- Gibbs energy + (<u>[[Energy]]</u>)
- Affinity of reaction + (<u>[[Force]]</u>)
- Statistical significance + (Amrhein V, Greenland S, McShane B (2019) Scientists rise up against statistical significance. Nature 567:305-7. - [[Amrhein 2019 Nature |Ā»Bioblast linkĀ«]])
- Liver mitochondria purification + (Armstrong C, Staples JF (2010) The role of succinate dehydrogenase and oxaloacetate in mitochondrial metabolism during mammalian hibernation and arousal. J Comp Physiol B 180: 775-783.)
- Second + (Bureau International des Poids et Mesures (2019) The International System of Units (SI). 9th edition:117-216 ISBN 978-92-822-2272-0. - [https://www.bipm.org/utils/common/pdf/si-brochure/SI-Brochure-9-EN.pdf Ā»Open Access pdfĀ«])
- % + (Bureau International des Poids et Mesures (2019) The International System of Units (SI). 9th edition:117-216. ISBN 978-92-822-2272-0 - [[Bureau International des Poids et Mesures 2019 The International System of Units (SI) |Ā»Bioblast linkĀ«]])
- SUIT-024 O2 ce-pce D056 + (Determination of the presence of ATPases in [[mitochondrial preparations]] - '''[[SUIT-024]]''')
- Intensive quantity + (Gnaiger E (1993) Nonequilibrium thermodynamics of energy transformations. Pure Appl Chem 65:1983-2002. http://dx.doi.org/10.1351/pac199365091983)
- Paywall journalism + (Gnaiger E (2019) Editorial: A vision on preprints for mitochondrial physiology and bioenergetics. https://doi.org/10.26124/mitofit:190002.v2)
- Living Communications + (Gnaiger E (2021) Beyond counting papers ā a mission and vision for scientific publication. https://doi.org/10.26124/bec:2021-0005)
- Elementary unit + (Gnaiger E (2021) The elementary unit ā canonical reviewer's comments on: Bureau International des Poids et Mesures (2019) The International System of Units (SI) 9th ed. https://doi.org/10.26124/mitofit:200004.v2)
- Substrates as electron donors + (Gnaiger E (2023) Complex II ambiguities ā FADH2 in the electron transfer system. MitoFit Preprints 2023.3.v3. https://doi.org/10.26124/mitofit:2023-0003.v3)
- Complex II ambiguities + (Gnaiger E (2024) Complex II ambiguities ā FADH<sub>2</sub> in the electron transfer system. J Biol Chem 300: 105470. https://doi.org/10.1016/j.jbc.2023.105470)
- Ambiguity crisis + (Gnaiger E (2024) Complex II ambiguities ā FADH<sub>2</sub> in the electron transfer system. J Biol Chem 300:105470. https://doi.org/10.1016/j.jbc.2023.105470)