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Difference between revisions of "OctPGMS pathway control state"

From Bioblast
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|description='''OctPGMS''': [[Octanoylcarnitine]] & [[Pyruvate]] & [[Glutamate]] & [[Malate]] & [[Succinate]].
|description='''OctPGMS''': [[Octanoylcarnitine]] & [[Pyruvate]] & [[Glutamate]] & [[Malate]] & [[Succinate]].


'''MitoPathway control state:''' FNS
'''MitoPathway control state:''' [[FNS]]


'''SUIT protocol:''' [[1PM;2D;3U;4G;5S;6Oct;7Rot;8Gp-]] - SUIT_RP1, [[SUIT_FNSGp(PGM)02]] - SUIT RP2
'''SUIT protocol:''' [[SUIT-001]], [[SUIT-002]], [[SUIT-015]]


This substrate combination supports convergent electron flow to the [[Q-junction]].
This substrate combination supports convergent electron flow to the [[Q-junction]].
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|mitopedia concept=SUIT state
|mitopedia concept=SUIT state
}}
}}
== OctPGMS(L) ==
::: ''More details''
::::Β» [[FNS]]
::::Β» [[Additive effect of convergent electron flow]]
::::Β» [[Respiratory_complexes#Respiratory_complexes_-_more_than_five |Respiratory complexes - more than five]]
::::Β» [[OctPGM pathway control state]]
::::Β» [[Convergent electron flow]]


== OctPGMS(P) ==
== OctPMS<sub>''L''</sub> ==
:::* [[SUIT_FNSGp(PGM)02]]_'''6S''': 1D 2Oct 3Mtit&Mc (&McNADH) 4P 5G '''<u>6S</u>''' 7U 8Gp 9Rot 10Ama 11Tm 12Azd'''
FNS pathway in the LEAK state can be evaluated in the following SUIT protocols:
Β 
== OctPGMS(E) ==
:::* [[Cross-linked respiratory states |Cross-linked respiratory state]] in the [[SUIT reference protocol]]
:::# [[1PM;2D;3U;4G;5S;6Oct;7Rot;8Gp-]]_'''6S''': 1PM 2D&Dc (&DcNADH) 3U 4Oct 5G '''<u>6S</u>''' 7Rot 8Gp 9Ama 10Tm 11Azd
:::# [[SUIT_FNSGp(PGM)02]]_'''7U''': 1D 2Oct 3Mtit&Mc (&McNADH) 4P 5G 6S '''<u>7U</u>''' 8Gp 9Rot 10Ama 11Tm 12Azd


== OctPMS<sub>''P''</sub> ==
FNS pathway in the OXPHOS state can be evaluated in the following SUIT protocols:
:::*[[SUIT-002]]
::::* DL-Protocol for isolated mitochondria and tissue homogenate (mt): [[SUIT-002 O2 mt D005]]
::::* DL-Protocol for permeabilized fibers (pfi): [[SUIT-002 O2 pfi D006]]
::::* DL-Protocol for permeabilized cells (pce): [[SUIT-002 O2 pce D007]]
:::*[[SUIT-015]]


== OctPMS<sub>''E''</sub> ==
FNS pathway in the ET state can be evaluated in the following SUIT protocols:
:::*[[SUIT-001]]
::::* DL-Protocol for isolated mitochondria and tissue homogenate (mt): [[SUIT-001 O2 mt D001]]
::::* DL-Protocol for permeabilized fibers (pfi): [[SUIT-001 O2 pfi D002]]
::::* DL-Protocol for permeabilized cells (pce): [[SUIT-001 O2 pce D003]]
:::*[[SUIT-015]]
----
----
[[File:SUIT-Reference-Protocol 1.jpg|700px |SUIT RP1]]<br />
[[File:SUIT-Reference-Protocol 1.jpg|700px |SUIT RP1]]<br />

Revision as of 14:48, 22 January 2019


high-resolution terminology - matching measurements at high-resolution


OctPGMS pathway control state

Description

OctPGMS: Octanoylcarnitine & Pyruvate & Glutamate & Malate & Succinate.

MitoPathway control state: FNS

SUIT protocol: SUIT-001, SUIT-002, SUIT-015

This substrate combination supports convergent electron flow to the Q-junction.

Abbreviation: OctPGMS

Reference: MiPNet21.06 SUIT reference protocol, SUIT reference protocol


MitoPedia concepts: SUIT state 

More details
Β» FNS
Β» Additive effect of convergent electron flow
Β» Respiratory complexes - more than five
Β» OctPGM pathway control state
Β» Convergent electron flow

OctPMSL

FNS pathway in the LEAK state can be evaluated in the following SUIT protocols:

OctPMSP

FNS pathway in the OXPHOS state can be evaluated in the following SUIT protocols:

OctPMSE

FNS pathway in the ET state can be evaluated in the following SUIT protocols:


SUIT RP1


SUIT RP2