Difference between revisions of "OctPGMS pathway control state"

Revision as of 07:01, 9 September 2016

high-resolution terminology - matching measurements at high-resolution

OctPGMS pathway control state

OctPGMS: Octanoylcarnitine & Pyruvate & Glutamate & Malate & Succinate.

MitoPathway control: FAO&CI&II

SUIT protocol: SUIT_FNSGp(PGM)01 - SUIT_RP1, SUIT_FNSGp(PGM)02 - SUIT RP2

This substrate combination supports convergent electron flow to the Q-junction.

Abbreviation: OctPGMS

Reference: MiPNet21.06 SUIT reference protocol, SUIT reference protocol

MitoPedia concepts: Respiratory state, SUIT state

SUIT_FNSGp(PGM)02_6S: 1D 2Oct 3Mtit&Mc (&McNADH) 4P 5G 6S 7U 8Gp 9Rot 10Ama 11Tm 12Azd

SUIT_FNSGp(PGM)01_6S: 1PM 2D&Dc (&DcNADH) 3U 4Oct 5G 6S 7Rot 8Gp 9Ama 10Tm 11Azd
SUIT_FNSGp(PGM)02_7U: 1D 2Oct 3Mtit&Mc (&McNADH) 4P 5G 6S 7U 8Gp 9Rot 10Ama 11Tm 12Azd

@@ Line 5: / Line 5: @@
 '''MitoPathway control:''' FAO<small>&</small>CI<small>&</small>II
-'''SUIT protocol:''' [[SUIT RP1]], [[SUIT RP2]]
+'''SUIT protocol:''' [[SUIT_FNSGp(PGM)01]] - SUIT_RP1, [[SUIT_FNSGp(PGM)02]] - SUIT RP2
 This substrate combination supports convergent electron flow to the [[Q-junction]].
@@ Line 16: / Line 16: @@
 == OctPGMS(P) ==
-* [[SUIT RP2]]_'''6S''': 1D 2Oct 3Mtit 3c (3NADH) 4P 5G '''<u>6S</u>''' 7U 8Gp 9Rot 10Ama 11Tm 12Azd'''
+* [[SUIT_FNSGp(PGM)02]]_'''6S''': 1D 2Oct 3Mtit&Mc (&McNADH) 4P 5G '''<u>6S</u>''' 7U 8Gp 9Rot 10Ama 11Tm 12Azd'''
 == OctPGMS(E) ==
 * [[Cross-linked respiratory states |Cross-linked respiratory state]] in the [[SUIT reference protocol]]
-# [[SUIT RP1]]_'''6S''': 1PM 2D 2c (2NADH) 3U 4Oct 5G '''<u>6S</u>''' 7Rot 8Gp 9Ama 10Tm 11Azd
+# [[SUIT_FNSGp(PGM)01]]_'''6S''': 1PM 2D&Dc (&DcNADH) 3U 4Oct 5G '''<u>6S</u>''' 7Rot 8Gp 9Ama 10Tm 11Azd
-# [[SUIT RP2]]_'''7U''': 1D 2Oct 3Mtit 3c (3NADH) 4P 5G 6S '''<u>7U</u>''' 8Gp 9Rot 10Ama 11Tm 12Azd
+# [[SUIT_FNSGp(PGM)02]]_'''7U''': 1D 2Oct 3Mtit&Mc (&McNADH) 4P 5G 6S '''<u>7U</u>''' 8Gp 9Rot 10Ama 11Tm 12Azd