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SUIT-001 O2 ce-pce D003

From Bioblast
Revision as of 04:17, 11 January 2019 by Gnaiger Erich (talk | contribs) (Gnaiger Erich moved page SUIT-01 O2 pce D03 to SUIT-001 O2 pce D03)


high-resolution terminology - matching measurements at high-resolution


SUIT-001 O2 ce-pce D003

Description

SUIT-RP1

Abbreviation: FNSGp(Oct,PGM)

Reference: SUIT-01 A: RP1

SUIT number: D03_ce1;1Dig;1PM;2D;2c;3U;4G;5S;6Oct;7Rot;8Gp;9Ama;10AsTm;11Azd

O2k-Application: O2


MitoPedia concepts: SUIT protocol, SUIT A 

MitoPedia: SUIT - SUIT reference protocol RP1
SUIT-category: FNSGp(PGM)
SUIT protocol pattern: orthogonal



Harmonized SUIT protocols

RP1 and RP2

SUIT RP1 SUIT-RP1 SUIT RP2 SUIT-RP2

SUIT RP1:1PM;2D:2c;3U;4G;5S;6Oct;7Rot;8Gp;9Ama;10AsTm;11Azd
SUIT RP2:1D;2M.1;3Oct;3c;4M2;5P;6G;7S;8Gp;9U;10Rot;11Ama;12AsTm;13Azd

RP1&RP2.png Harmonization between RP1 and RP2

RP1 and RP2 in cells

RP1 can be assessed in cells after the selective plasma membrane permeabilization. Digitonin is a mild detergent that permeabilizes plasma membranes. The optimum effective digitonin concentration for complete plasma membrane permeabilization of cultured cells can be determined directly in a respirometric protocol (see Digitonin). The use of intact cells allows the possibility to evaluate respiration in two different modules: intact cells and permeabilized cells. ROUTINE respiration (ce1) is obtained before digitonin is employed, whereas after the use of digitonin we can address differentet Electron transfer-pathway states.

SUIT RP1 in cells:ce1;1Dig;1PM;2D:2c;3U;4G;5S;6Oct;7Rot;8Gp;9Ama;10Tm;11Azd
SUIT RP2 in cells:ce1;1Dig;1D;2M.1;3Oct;3c;4M2;5P;6G;7S;8Gp;9U;10Rot;11Ama;12AsTm;13Azdd

Reference protocol RP1&RP2 pce.png Harmonization between RP1 and RP2 in cells

RP1 and RP2 in PBMCs and PTLs

In PBMCs and PLTs the reference protocol RP1 is performed in the absense of Oct: SUIT 1 for PBMCs and PTLs

SUIT RP1 for PBMCs and PLTs:1PM;2D;2c;3U;4G;5S;6Rot;7Gp;8Ama;9AsTm;10Azd
SUIT RP2:1D;2M.1;3Oct;3c;4M2;5P;6G;7S;8Gp;9U;10Rot;11Ama;12AsTm;13Azd


Reference protocol RP1&RP2 pce PBMCs PTLs.png Harmonization between RP1 and RP2 in PBMC and PTL cells



References