Cytochrome c: Difference between revisions
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|description='''Cytochrome ''c''''' is a component of the electron transfer system ([[ETS]]) in mitochondria. It is a small heme protein loosely associated with the outer side of the inner mitochondrial membrane. The heme group of cytochrome ''c'' transfers electrons from [[Complex III]] to [[Complex IV]]. The release of '''cytochrome ''c''''' into the cytoplasm is associated with apoptosis. [http://en.wikipedia.org/wiki/Cytochrome_c]. | |description='''Cytochrome ''c''''' is a component of the electron transfer system ([[ETS]]) in mitochondria. It is a small heme protein loosely associated with the outer side of the inner mitochondrial membrane. The heme group of cytochrome ''c'' transfers electrons from [[Complex III]] to [[Complex IV]]. The release of '''cytochrome ''c''''' into the cytoplasm is associated with apoptosis. [http://en.wikipedia.org/wiki/Cytochrome_c]. | ||
|info=[[MiPNet09.12]]; [[ | |info=[[MiPNet09.12]]; [[Gnaiger 2002 Biochem Soc Trans]] | ||
|type=Substrate ETS | |type=Substrate ETS | ||
}} | }} |
Revision as of 10:27, 4 April 2014
Description
Cytochrome c is a component of the electron transfer system (ETS) in mitochondria. It is a small heme protein loosely associated with the outer side of the inner mitochondrial membrane. The heme group of cytochrome c transfers electrons from Complex III to Complex IV. The release of cytochrome c into the cytoplasm is associated with apoptosis. [1].
Abbreviation: c
Reference: MiPNet09.12; Gnaiger 2002 Biochem Soc Trans
MitoPedia topics: Substrate and metabolite
Application in HRR
c: Cytochrome c (from equine heart), Sigma C 7752, 50 mg, store at -20 ยฐC; FW = 12500
Caution: Chemicals stored in the fridge or freezer should be allowed to reach room temperature before opening.
Preparation of 4 mM Cytochrome c solution (dissolved in H2O):
- 1) weigh 50 mg of Cytochrome c into a small glass beaker. Difficult to weigh, since the powder is electromagnetic.
- 2) add 1 ml H2O. Dissolves easily.
- 3) divide into 0.2 ml portions
- 4) store frozen at -20 ยฐC
Oxygraph-2k Manual Titrations: MiPNet09.12
- Titration volume: 5 ยตl using a 25 ยตl syringe
- Final conc. in 2 ml O2k-chamber: 10 ยตM
Cytochrome c test for outer mt-membrane integrity
Outer mitochondrial membrane damage can be evaluated from stimulation of respiration by exogenously added cytochrome c.
Determination of cytochrome c loss
Adding cytochrome c (10 ยตM; see Gnaiger 2002 Biochem Soc Trans) to stimulate respiratory activity provides an estimate of cytochrome c loss. In general, maximum respiratory activity is obtained under conditions of saturating substrate concentrations and system dependent in the coupled (ADP stimulated) State P or non-coupled (uncoupler stimulated) State E.
Cytochrome c test
When using cytochrome c as a quality control for permeabilised muscles from various species, which cytochrome c should we use (a wide range of types of cytochrome c is available from Sigma-Aldrich) and at which concentration?
We apply routinely cytochrome c from Sigma C 7752 (see MiPNet03.02-Selected Media and Chemicals). It would be interesting to compare the consequence of application of different sources of cytochrome c.
A detailed discussion on the dependence of respiration in isolated mitochondria and permeabilized cardiac fibers is found in refs. 1 and 2, for the first time showing that cytochrome c kinetics is different when studying a segment of the ETS (CII-linked: succinate+rotenone) versus the isolated step of cytochrome c oxidase (CIV; ascorbate+TMPD+antimycin A). For CII-linked respiration, an exernal cytochrome c concentration of 10 ยตM yields kinetic saturation (monophasic hyperbolic), but kinetics is biphasic for CIV and 10 ยตM is not saturating (ref. 1 and 2).
Importantly, cytochrome c increases the chemical background oxygen flux in the presence of ascorbate and TMPD, dependent on oxygen concentration and cytochrome c concentration, and appropriate chemical background corrections are required (ref. 3). Without ascorbate and TMPD, added cytochrome c is stable.
Evaluation of the cytochrome c effect, when respiration is slightly unstable: Mark respiration just before cytochrome c addition and after. Take these to values to calculate the increase of respiration due to cytochrome c addition.
At which step of the protocol should cytochrome c be added?
If a stimulatory effect of cytochrome c is observed, respiratory capacities measured before cytochrome c addition might be cytochrome c limited and therefore underestimated. This provides an argument to add cytochrome c at an early state of the protocol.
It is important not to add cytochrome c in a LEAK state: There is always an unexplained activation of respiration, unrelated to the injury of the outer mt-membrane. Add cytochrome c only after activation by ADP.
Cytochrome c release
Cytochrome c release induced by sample preparation
A preparation induced damage of the outer mitochondrial membrane and as a result subsequent loss of cytochrome c can be detected by a stimulation of respiration after the addition of cytochrome c. The preparation induced damage can also affect the respiratory complexes. Therefore, experimental runs showing a preparation induced cytochrome c release should be excluded from the final data set. In perfectly prepared muscle fibers cytochrome c should have no stimulatory effect on maximum respiratory activity, in liver biopsies a small effect is observed, even in carefully prepared samples.
Cytochrome c release induced by treatment
Treatment-triggered cytochrome c release, e.g. cell death induction, has to be distinguished from preparation induced damage. If cytochrome c is released as a result of apoptosis induction, this is a biological phenomenon and a relevant result.
References
- Gnaiger E, Kuznetsov AV (2002) Mitochondrial respiration at low levels of oxygen and cytochrome c. Biochem. Soc. Trans. 30: 242-248.
- Kuznetsov AV, Schneeberger S, Seiler R, Brandacher G, Mark W, Steurer W, Saks V, Usson Y, Margreiter R, Gnaiger E (2004) Mitochondrial defects and heterogeneous cytochrome c release after cardiac cold ischemia and reperfusion. Am. J. Physiol. Heart Circ. Physiol. 286: H1633โH1641.