SUIT protocol library

This page is in preparation (intern wiki: Library of protocols)

Classes of protocols with coupling and substrate control

Linear

1. Linear coupling control: at a single substrate state (classical State 3 -> State 4).
2. Linear substrate control: at a single coupling state (unusual).
3. Monodirectional linear coupling control: L_N -> P_D -> E_F
4. Bidirectional linear coupling control: L_N -> P_D -> L_Omy -> E_F

• CI
• CII
• CI+CII
• CIV
• ETF
• GPDH

Orthogonal

1. Orthogonal coupling -> substrate control (mono- or bidirectional)
2. Orthogonal substrate -> coupling control (mono- or bidirectional)

Diametral

1. Diametral coupling -> substrate ->> control (mono- or bidirectional)
2. Diametral substrate -> coupling ->> control (mono- or bidirectional)

References and Notes

• MitoPedia: Respiratory states
• List_of_terms_and_abbreviations

• Gnaiger_2007_MitoPathways
• Gnaiger_2009_Int J Biochem Cell Biol
• Pesta 2012 Methods Mol Biol
• Pesta 2011 Am J Physiol Regul Integr Comp Physiol
• Sumbalova 2011 Abstract Bordeaux