MitoPedia: BEC

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Bioenergetics Communications        
Gnaiger 2020 BEC MitoPathways
Gnaiger Erich et al ― MitoEAGLE Task Group (2020) Mitochondrial physiology. Bioenerg Commun 2020.1.
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Bioenergetics Communications is the Open Access journal for publishing scientific and technical advances in bioenergetics and mitochondrial physiology in Living Communications Open Access logo.png

MitoPedia: BEC

Bioenergetics Communications
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MitoPedia: Bioenergetics Communications

Allegations of research misconductAllegations of research misconduct are handled with care. Publishers and editors shall take reasonable steps to identify and prevent the publication of papers where research misconduct has occurred, including plagiarism, citation manipulation, and data falsification/fabrication, among others. In no case shall a journal or its editors encourage such misconduct, or knowingly allow such misconduct to take place. In the event that a journal's publisher or editors are made aware of any allegation of research misconduct relating to a published article in their journal, the publisher or editor shall follow COPE's guidelines (or equivalent) in dealing with allegations.
BEC 2020.1 doi10.26124bec2020-0001.v1
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Biomedical sentence similarity
Comma for separating a term and its abbreviation,Should we used a comma for separating a term and its abbreviation in the text? The SI Brochure frequently does not use a comma. The comma might be added, if it helps to clarify the distinction between the term and its abbreviation. The example “reduced Q fraction, Qr” – the sequence of Q and Qr may be confusing without comma. There will always be examples, where it is not clear, if a comma is needed.
Creative Commons Attribution LicenseOpen Access preprints (not peer-reviewed) and articles (peer-reviewed) distributed under the terms of the Creative Commons Attribution License allow unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are credited. © remains with the authors, who have granted the publisher license in perpetuity.
Decimal marker and spaces between groups of numerals.A decimal marker is used to separate the integral part of numbers from the decimal part. The SI recommends: "the symbol for the decimal marker shall be either the point on the line or the comma on the line". In English language versions, the dot (point on the line) should be used uniquely as the decimal marker. To avoid ambiguities, BEC follows the SI recommendation that “Numbers may be divided in groups of three in order to facilitate reading; neither dots nor commas are ever inserted in the spaces between groups” (pages 183-184).
Digital Object IdentifierDOIA Digital Object Identifier, DOI, is a persistent identifier used to uniquely identify online publications in order to ensure they remain traceable, searchable and citable over the long term. Compared to other types of persistent identifiers, the DOI system is widespread and well established in the life sciences arena, and it provides widely accepted visible proof that a publication is citable.
Ethics on publishingEthics on publishing follow COPE's guidelines (or equivalent). A journal's policy on publishing ethics should be clearly visible on its website, and should refer to: (1) Journal policies on authorship and contributorship; (2) How the journal will handle complaints and appeals; (3) Journal policies on conflicts of interest / competing interests; (4) Journal policies on data sharing and reproducibility; (5) Journal's policy on ethical oversight; (6) Journal's policy on intellectual property; and (7) Journal's options for post-publication discussions and corrections.
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Gnaiger 2020 BEC MitoPathways
HyphenationHyphenation is used to connect two words (compound words) or two parts of a word to clarify the meaning of a sentence. The same two words may be hyphenated or not depending on context. Hyphenation may present a problem when searching for a term such as 'Steady state'. It is helpful to write 'steady-state measurement', to clarify that the measurement is performed at steady state, rather than implying that a state measurement is steady. But this does not imply that hyphenation is applied to the 'measurement performed at steady state'. Thus, the key word is 'steady state'. Compound adjectives should be hyphenated (steady-state measurement), but if the compound adjective follows the term (measurement at steady state), hyphenation does not add any information and should be avoided. Find more examples and guidelines in the grammarly blog on Hyphen and in
International Standard Serial NumberISSNThe International Standard Serial Number, ISSN, is a code used to identify periodical publications, independent of which media are used (print and/or electronic).
Journal indexingJournal indexing allows publications to be found on search tools/databases. Each database might have different criteria of inclusion.
Journal issueAn issue of a journal or periodical is a number, which typically indicates how many times a volume of the journal has been published in sequence.
Journal volumeThe volume of a journal or periodical is a number, which in many cases indicates the sequential number of years the journal has been published. Alternatively, the volume number may indicate the current year, independent of the year in which the journal published its first volume. A volume may be subdivided into issues.
Keywords-MitoPedia in BECKeywords—MitoPedia is the concept to link keywords in articles published in Bioenergetics Communications (BEC) to MitoPedia terms. Authors should consider the message in the selected keywords. Provide consistent definitions of your keywords by linking them to MitoPedia. Extend MitoPedia entries critically by your contributions. The BEC editorial team will hyperlink your keywords with MitoPedia, and a reference to your BEC publication will be generated automatically from the MitoPedia term to your publication. With your contributions, BEC elevates keywords to terms with meaning. Your article gains visibility.
Living CommunicationsLCWith Living Communications, Bioenergetics Communications (BEC) is taking the next step from pre-print to re-print. Living Communications allow additions and corrections of a publication with Open Peer Review, such that the publication can evolve with full traceability, instead of remaining a static outdated paper. The concept of Living Communications persues a novel culture of scientific communication, addressing the conflict between long-term elaboration and validation of results and concepts, versus sharing quickly important preliminary and controversial contributions. Updated versions of Living Communications evolve on the basis of additions or corrections posted on the BEC website of the resource publication, until a new version is published. Evolution of a Living Communication is more resourceful and efficient than a ‘new’ publication. Living Communications provide a pathway along the scientific culture of lively debate towards tested and trusted milestones of research, from pre-print to re-print, from initial steps to next steps.
Manuscript template for MitoFit PreprintsManuscripts template for MitoFit Preprints.
MitoFit PreprintsMitoFit PrepMitoFit Preprints is an Open Access preprint server for mitochondrial physiology and bioenergetics.
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Open AccessOA
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Open Access (OA) academic articles comprise all different forms of published research that are distributed online, free of charge and with an open license to facilitate the distribution and reuse. The open access repositories serve as the perfect vehicle to transmit free knowledge, including but not limited to peer-reviewed and non-peer-reviewed academic journal articles, conference papers, theses, book chapters and monographs. Driven by the problems of social inequality caused by restricting access to academic research, the Open Access movement changes the funding system of published literature allowing for more readers and thus increased access to scientific knowledge, as well as addressing the economic challenges and unsustainability of academic publishing. In addition to being free to read (gratis), open access articles may also be free to use (libre) where the copyright is held by the authors and not the publisher.
Publication efficiencyFr,a/pPublication efficiency is the fraction Fr,a/p of reproducible publications Nr which are among the number Na of publications that receive attention and meaningful interpretation, per total count Np of all published communications. Publication efficiency Fr,a/p = Fr/p·Fa/p is low due to (1) the reproducibility crisis expressed as low reproducibility efficiency Fr/p = Nr/Np, and (2) the inflation crisis expressed as low attention efficiency Fa/p = Na/Np. Estimates of these partial efficiencies vary from field to field. With Fr/p=0.15 and Fa/p=0.05, the current publication efficiency is as low as 0.0075, or only 0.75 % of all presently published communictions are reproducible and receive attention and meaningful interpretation. Reduction of the number of irreproducible zero-value publications is the most effective measure to reduce the paper mass excess (PME) in the reproducibility-inflation (R&I)-crisis. Several regulatory mechanisms for improvement are practically ignored although theoretically available.
Quantities, symbols, and unitsIn the context of quantities, symbols, and units, a code is required to convert terms defining physicochemical quantities into symbols (encoding) and to decode symbols as used in equations, text, and figures. Then symbols and abbreviations gain meaning. Simple symbols — such as Q or N — are used with different meanings depending on context (think of Q for heat and Q for electric charge; or N for number of cells and N for number of O2 molecules). The context provides the code. When the context is extended, the symbols have to be expanded too, including more detail to avoid confusion (Qth versus Qel; Nce versus NO2). Then symbols may appear too complicated, loosing the function of sending their message quickly. There is no single best way to design the right symbol or to replace meaningful symbols (Qel) by ambiguous abbreviations (Q) — all depends on context. We need to use the adequate medium (words, symbols, and abbreviations; equations, text, and figures; videos and slide presentations) and provide the code to achieve communication. The medium is the message, the message is the meaning — from Marshall McLuhan to Hofstadter.
SI prefixesThere are 20 SI prefixes defined to represent multiples and submiltiples of SI units.
Submission form for MitoFit PreprintsManuscripts submitted to MitoFit Preprints have to be accompanied by this submission form.
Bioenergetics Communications

References: Bioenergetics Communications

 Was published in yearHas title
Gnaiger 2020 BEC MitoPathways2020Gnaiger E (2020) Mitochondrial pathways and respiratory control. An introduction to OXPHOS analysis. 5th ed. Bioenerg Commun 2020.2:112 pp.
BEC 2020.1 doi10.26124bec2020-0001.v12020Gnaiger Erich et al ― MitoEAGLE Task Group (2020) Mitochondrial physiology. Bioenerg Commun 2020.1:1-44.
Gnaiger 2019 MitoFit Preprints Editorial2019-04-24Gnaiger E (2019) Editorial: A vision on preprints for mitochondrial physiology and bioenergetics. MitoFit Preprint Arch doi:10.26124/mitofit:190002.v2.
Triggle 2017 Drug Dev Res2017Triggle Chris R, Triggle David J (2017) From Gutenberg to Open Science: an unfulfilled odyssey. Drug Dev Res 78:3-23.
Begley 2015 Circ Res2015Begley CG, Ioannidis JPA (2015) Reproducibility in science: improving the standard for basic and preclinical research. Circ Res 116:116-26.
Ioannidis 2014 Lancet2014Ioannidis JPA, Greenland S, Hlatky MA, Khoury MJ, Macleod MR, Moher D, Schulz KF, Tibshirani R (2014) Increasing value and reducing waste in research design, conduct, and analysis. Lancet 383:166-75.
Ioannidis 2005 PLoS Med2005Ioannidis JPA (2005) Why most published research findings are false. PLoS Med 2005 Aug;2(8):e124.
Bioenergetics Communications

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