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Difference between revisions of "Talk:Cell ergometry"

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== Old nomenclature - Cell ergometry: living cells ==
=== Respiratory coupling states in living cells ===
:::: [[Image:R.jpg|link=ROUTINE respiration|ROUTINE]] [[ROUTINE respiration]], ''R'' = ''R´''-''Rox''
:::::::: [[Image:R-L.jpg|50 px|link=Free ROUTINE activity |Free ROUTINE activity]] [[Free ROUTINE activity]], ''≈R'' = ''R-L''
:::: [[Image:E.jpg|link=ET capacity|ET capacity]] [[ET capacity]], ''E'' = ''E´''-''Rox''
:::::::: [[Image:E-L.jpg|50 px|link=Free ET capacity |Free ET capacity]] [[Free ET capacity]], ''≈E'' = ''E-L''
:::::::: [[Image:ExR.jpg|60 px|link=Excess E-R capacity|Excess ''E-R'' capacity]] [[Excess E-R capacity|Excess ''E-R'' capacity]], ''ExR'' = ''E-R''
:::: [[Image:L.jpg|link=LEAK respiration|LEAK]] [[LEAK respiration]], ''L'' = ''L´''-''Rox''
:::: [[Image:ROX.jpg|link=Residual oxygen consumption|ROX]] [[Residual oxygen consumption]], ROX (subtracted from apparent fluxes (''R´, E´, L´'')
 
=== Respiratory coupling control ratios in living cells ===
:::: [[Image:L over R.jpg|50 px|link=L/R coupling control ratio |''L/R'' coupling control ratio]] [[L/R coupling control ratio |''L/R'' coupling control ratio]], ''L/R''
:::: [[Image:L over E.jpg|50 px|link=LEAK-control ratio |LEAK-control ratio]] [[LEAK-control ratio]], ''L/E''
:::: [[Image:R over E.jpg|50 px|link=ROUTINE-control ratio |ROUTINE-control ratio]] [[ROUTINE-control ratio]], ''R/E''
 
 
=== Respiratory coupling control factors in living cells ===
:::: [[Image:j--R.jpg|50 px|link=ROUTINE coupling efficiency |ROUTINE coupling efficiency]] [[ROUTINE coupling efficiency]]: ''j<sub>≈R</sub>'' = ''≈R/R'' =(''R-L'')/''R'' = 1-''L/R''
:::: [[Image:j--E.jpg|50 px|link=E-L coupling efficiency |E-L coupling efficiency]] [[E-L coupling efficiency]], ''E-L'' control factor: ''j<sub>≈E</sub>'' = ''≈E/E'' = (''E-L'')/''E'' = 1-''L/E''
:::: [[Image:jExR.jpg|50 px|link=Excess E-R capacity factor |Excess ''E-R'' capacity factor]] [[Excess E-R capacity factor |Excess ''E-R'' capacity factor]], ''E-R'' coupling control factor: ''j<sub>ExR</sub>'' = (''E-R'')/''E'' = 1-''R/E''
:::: [[Image:NetR over E.jpg|60 px|link=NetROUTINE control ratio |netROUTINE control ratio]] [[netROUTINE control ratio]], ''≈R/E'' control ratio: ''≈R/E'' = (''R-L'')/''E''
 
 
[[File:EPL-net and excess.jpg|right|400px|thumb|[[Gnaiger 2020 BEC MitoPathways |Gnaiger 2020 BEC MitoPathways]]: Fig. 2.4.]]
== Cell ergometry: permeabilized cells ==
=== Respiratory coupling states in mt-preparations ===
:::: [[Image:P.jpg|link=OXPHOS capacity|OXPHOS]] [[OXPHOS capacity]], ''P'' = ''P´''-''Rox''
:::::::: [[Image:P-L.jpg|50 px|link=Free OXPHOS capacity |Free OXPHOS capacity]] [[Free OXPHOS capacity]], ''≈P'' = ''P-L''
:::: [[Image:E.jpg|link=ET capacity|ET capacity]] [[ET capacity]], ''E'' = ''E´''-''Rox''
:::::::: [[Image:E-L.jpg|50 px|link=Free ET capacity |Free ET capacity]] [[Free ET capacity]], ''≈E'' = ''E-L''
:::::::: [[Image:ExP.jpg|60 px|link=Excess E-P capacity |Excess ''E-P'' capacity]] [[Excess E-P capacity |Excess ''E-P'' capacity]], ''ExP'' = ''E-P''
::::[[Image:L.jpg|link=LEAK respiration|LEAK]] [[LEAK respiration]], ''L'' = ''L´''-''Rox''
:::: [[Image:ROX.jpg|link=Residual oxygen consumption|ROX]] [[Residual oxygen consumption]], ''Rox'' (subtracted from ''P´, E´, L´'')
 
 
=== Respiratory coupling control ratios in mt-preparations ===
:::: [[Image:L over P.jpg|50 px|link=L/P coupling control ratio |''L/P'' coupling control ratio]] [[L/P coupling control ratio |''L/P'' coupling control ratio]]: ''L/P''
:::: [[Image:L over E.jpg|50 px|link=LEAK-control ratio |LEAK-control ratio]] [[LEAK-control ratio]], ''L/E''
:::: [[Image:P over E.jpg|50 px|link=OXPHOS-control ratio |OXPHOS-control ratio]] [[OXPHOS-control ratio]], ''P/E''
 
 
=== Respiratory coupling control factors in mt-preparations ===
:::: [[Image:j--P.jpg|50 px|link=OXPHOS-coupling efficiency |OXPHOS-coupling efficiency]] [[OXPHOS-coupling efficiency]], (''P-L'' or ''≈P'' control factor): ''j<sub>≈P</sub>'' = ''≈P/P'' = (''P-L'')/''P'' = 1-''L/P''
:::: [[Image:j--E.jpg|50 px|link=E-L coupling efficiency |E-L coupling efficiency]] [[E-L coupling efficiency]], ''E-L'' control factor: ''j<sub>≈E</sub>'' = ''≈E/E'' = (''E-L'')/''E'' = 1-''L/E''
:::: [[Image:jExP.jpg|50 px|link=Excess E-P capacity factor |Excess ''E-P'' capacity factor]] [[Excess E-P capacity factor |Excess ''E-P'' capacity factor]], ''E-P'' coupling control factor: ''j<sub>ExP</sub>'' = (''E-P'')/''E'' = 1-''P/E''
:::: [[Image:NetP over E.jpg|60 px|link=NetOXPHOS control ratio |netOXPHOS control ratio]] [[netOXPHOS control ratio]], ''≈P/E'' control ratio: ''≈P/E'' = (''P-L'')/''E''
 
 
 
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Latest revision as of 18:59, 7 February 2021

Old nomenclature - Cell ergometry: living cells

Respiratory coupling states in living cells

ROUTINE ROUTINE respiration, R = -Rox
Free ROUTINE activity Free ROUTINE activity, ≈R = R-L
ET capacity ET capacity, E = -Rox
Free ET capacity Free ET capacity, ≈E = E-L
Excess E-R capacity Excess E-R capacity, ExR = E-R
LEAK LEAK respiration, L = -Rox
ROX Residual oxygen consumption, ROX (subtracted from apparent fluxes (R´, E´, L´)

Respiratory coupling control ratios in living cells

L/R coupling control ratio L/R coupling control ratio, L/R
LEAK-control ratio LEAK-control ratio, L/E
ROUTINE-control ratio ROUTINE-control ratio, R/E


Respiratory coupling control factors in living cells

ROUTINE coupling efficiency ROUTINE coupling efficiency: j≈R = ≈R/R =(R-L)/R = 1-L/R
E-L coupling efficiency E-L coupling efficiency, E-L control factor: j≈E = ≈E/E = (E-L)/E = 1-L/E
Excess E-R capacity factor Excess E-R capacity factor, E-R coupling control factor: jExR = (E-R)/E = 1-R/E
netROUTINE control ratio netROUTINE control ratio, ≈R/E control ratio: ≈R/E = (R-L)/E


Cell ergometry: permeabilized cells

Respiratory coupling states in mt-preparations

OXPHOS OXPHOS capacity, P = -Rox
Free OXPHOS capacity Free OXPHOS capacity, ≈P = P-L
ET capacity ET capacity, E = -Rox
Free ET capacity Free ET capacity, ≈E = E-L
Excess E-P capacity Excess E-P capacity, ExP = E-P
LEAK LEAK respiration, L = -Rox
ROX Residual oxygen consumption, Rox (subtracted from P´, E´, L´)


Respiratory coupling control ratios in mt-preparations

L/P coupling control ratio L/P coupling control ratio: L/P
LEAK-control ratio LEAK-control ratio, L/E
OXPHOS-control ratio OXPHOS-control ratio, P/E


Respiratory coupling control factors in mt-preparations

OXPHOS-coupling efficiency OXPHOS-coupling efficiency, (P-L or ≈P control factor): j≈P = ≈P/P = (P-L)/P = 1-L/P
E-L coupling efficiency E-L coupling efficiency, E-L control factor: j≈E = ≈E/E = (E-L)/E = 1-L/E
Excess E-P capacity factor Excess E-P capacity factor, E-P coupling control factor: jExP = (E-P)/E = 1-P/E
netOXPHOS control ratio netOXPHOS control ratio, ≈P/E control ratio: ≈P/E = (P-L)/E


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Cell ergometry has been accessed more than

  • 10,000 times (2018-03-11)
  •  5,000 times (2016-01-08)