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ASK Query
[[Category:Publications]] [[Instrument and method::Oxygraph-2k]]
SQL Query
SELECT DISTINCT
t0.smw_id AS id,
t0.smw_title AS t,
t0.smw_namespace AS ns,
t0.smw_iw AS iw,
t0.smw_subobject AS so,
t0.smw_sortkey AS sortkey, t0.smw_sort
FROM
`smw_object_ids` AS t0
INNER JOIN
(`smw_fpt_inst` AS t2
INNER JOIN
`t3` AS t3 ON t2.o_id=t3.id
INNER JOIN
`smw_di_blob` AS t4 ON t2.s_id=t4.s_id) ON t0.smw_id=t2.s_id
WHERE
(
((t4.o_hash='Oxygraph-2k') AND t4.p_id=80876)
)
AND t0.smw_iw!=':smw'
AND t0.smw_iw!=':smw-delete'
AND t0.smw_iw!=':smw-redi'
ORDER BY
t0.smw_sort ASC
LIMIT
55
OFFSET
600
t0.smw_id AS id,
t0.smw_title AS t,
t0.smw_namespace AS ns,
t0.smw_iw AS iw,
t0.smw_subobject AS so,
t0.smw_sortkey AS sortkey, t0.smw_sort
FROM
`smw_object_ids` AS t0
INNER JOIN
(`smw_fpt_inst` AS t2
INNER JOIN
`t3` AS t3 ON t2.o_id=t3.id
INNER JOIN
`smw_di_blob` AS t4 ON t2.s_id=t4.s_id) ON t0.smw_id=t2.s_id
WHERE
(
((t4.o_hash='Oxygraph-2k') AND t4.p_id=80876)
)
AND t0.smw_iw!=':smw'
AND t0.smw_iw!=':smw-delete'
AND t0.smw_iw!=':smw-redi'
ORDER BY
t0.smw_sort ASC
LIMIT
55
OFFSET
600
SQL Explain
ID | select_type | table | type | possible_keys | key | key_len | ref | rows | filtered | Extra |
---|---|---|---|---|---|---|---|---|---|---|
1 | SIMPLE | t3 | ALL | PRIMARY | 7 | 100.00 | Using temporary; Using filesort |
Auxilliary Tables
- Temporary table t3
Recursively computed hierarchy for element(s) (80971).
SELECT s_id FROM `smw_fpt_subc` WHERE o_id=80971 LIMIT 1
Query Metrics
Query-Size:3Query-Depth:1
Errors and Warnings
NoneYear | Reference | Organism | Tissue;cell | |
---|---|---|---|---|
Chang 2018 Biophys J | Mitochondrial dysfunction in malignant hyperthermia susceptible skeletal muscle. | Human Mouse | Skeletal muscle | |
Chang 2018 Br J Anaesth | Oxygen metabolism in malignant hyperthermia susceptible skeletal muscle and the effects of static halothane exposure. | Skeletal muscle | ||
Chang 2018 Life Sciences Meeting 2018 Innsbruck AT | pH dependence of mitochondrial respiration and H2O2 production in oral cancer cells β a pilot study. | Human | HEK Kidney | |
Chang 2020 J Biol Chem | 2020 | Chang L, Liu X, Diggle CP, Boyle JP, Hopkins PM, Shaw MA, Allen PD (2020) Bioenergetic defects in muscle fibers of RYR1 mutant knock-in mice associated with malignant hyperthermia. J Biol Chem 295:15226-35. | Mouse | Skeletal muscle |
Chang 2021 J Fungi (Basel) | 2021 | Chang CK, Kao MC, Lan CY (2021) Antimicrobial activity of the peptide LfcinB15 against Candida albicans. J Fungi (Basel) 7:519. | Fungi | |
Chao 2018 J Burn Care Res | Altered renal and cardiac mitochondrial activity after 40% TBSA in a swine model. | Pig | Heart Kidney | |
Chao 2019 Am J Physiol Cell Physiol | 2019 | Chao T, Gomez BI, Heard TC, Smith BW, Dubick MA, Burmeister DM (2019) Burn-induced reductions in mitochondrial abundance and efficiency are more pronounced with small volumes of colloids in swine. Am J Physiol Cell Physiol 317:C1229-38. | Pig | Heart |
Chao 2019 J Appl Physiol (1985) | 2019 | Chao T, Burmeister DM, Corona BT, Greising SM (2019) Oxidative pathophysiology following volumetric muscle loss injury in a porcine model. J Appl Physiol (1985) 126:1541-49. | Pig | Skeletal muscle |
Charles 2020 Nanomedicine (Lond) | 2020 | Charles C, Cohen-Erez I, Kazaoka B, Melnikov O, Stein DE, Sensenig R, Rapaport H, Orynbayeva Z (2020) Mitochondrial responses to organelle-specific drug delivering nanoparticles composed of polypeptide and peptide complexes. Nanomedicine (Lond) 15:2917-32. | Human | Endothelial;epithelial;mesothelial cell |
Chatfield 2019 JACC Basic Transl Sci | 2019 | Chatfield KC, Sparagna GC, Chau S, Phillips EK, Ambardekar AV, Aftab M, Mitchell MB, Sucharov CC, Miyamoto SD, Stauffer BL (2019) Elamipretide improves mitochondrial function in the failing human heart. JACC Basic Transl Sci 4:147-57. | Human | Heart |
Chausse 2014 Endocrinology | 2014 | Chausse B, Solon C, Caldeira da Silva CC, Masselli Dos Reis IG, Manchado-Gobatto FB, Gobatto CA, Velloso LA, Kowaltowski AJ (2014) Intermittent fasting induces hypothalamic modifications resulting in low feeding efficiency, low body mass and overeating. Endocrinology 9:e97673. | Rat | Skeletal muscle |
Chausse 2015 PLoS One | 2015 | Chausse B, Vieira-Lara MA, Sanchez AB, Medeiros MH, Kowaltowski AJ (2015) Intermittent fasting results in tissue-specific changes in bioenergetics and redox state. PLoS One 10:e0120413. | Rat | Heart Skeletal muscle Nervous system Liver |
Chausse 2020 Brain Behav Immun | 2020 | Chausse B, Lewen A, Poschet G, Kann O (2020) Selective inhibition of mitochondrial respiratory complexes controls the transition of microglia into a neurotoxic phenotype in situ. Brain Behav Immun 88:802-14. | Mouse | Nervous system |
Chavanelle 2017 Sci Rep | 2017 | Chavanelle V, Boisseau N, Otero YF, Combaret L, Dardevet D, Montaurier C, Delcros G, Peltier SL, Sirvent P (2017) Effects of high-intensity interval training and moderate-intensity continuous training on glycaemic control and skeletal muscle mitochondrial function in db/db mice. Sci Rep 7:204. | Mouse | Skeletal muscle |
Chekulayev 2015 Biochem Biophys Rep | 2015 | Chekulayev V, Mado K, Shevchuk I, Koit A, Kaldma A, Klepinin A, Timohhina N, Tepp K, Kandashvili M, Ounpuu L, Heck K, Truu L, Planken A, Valvere V, Kaambre T (2015) Metabolic remodeling in human colorectal cancer and surrounding tissues: alterations in regulation of mitochondrial respiration and metabolic fluxes. Biochem Biophys Rep 4:111-25. | Human | Endothelial;epithelial;mesothelial cell |
Chen 2016 Nat Chem Biol | 2016 | Chen YJ, Mahieu NG, Huang X, Singh M, Crawford PA, Johnson SL, Gross RW, Schaefer J, Patti GJ (2016) Lactate metabolism is associated with mammalian mitochondria. Nat Chem Biol 12:937-43. | Human | HeLa |
Chen 2018 Endocrinology | 2018 | Chen Y, McCommis KS, Ferguson D, Hall AM, Harris CA, Finck BN (2018) Inhibition of the mitochondrial pyruvate carrier by tolylfluanid. Endocrinology 159:609-21. | Mouse | Fat |
Chen 2018 Hum Mol Genet | 2018 | Chen A, Tiosano D, Guran T, Baris HN, Bayram Y, Mory A, Shapiro-Kulnane L, Hodges CA, Coban Akdemir Z, Turan S, Jhangiani SN, van den Akker F, Hoppel CL, Salz HK, Lupski JR, Buchner DA (2018) Mutations in the mitochondrial ribosomal protein MRPS22 lead to primary ovarian insufficiency. Hum Mol Genet 27:1913-26. | Human | Endothelial;epithelial;mesothelial cell Fibroblast |
Chen 2018 iScience | 2018 | Chen YC, Cheng TH, Lin WL, Chen CL, Yang WY, Blackstone C, Chang CR (2018) Srv2 Is a pro-fission factor that modulates yeast mitochondrial morphology and respiration by regulating actin assembly. iScience 11:305-17. | Saccharomyces cerevisiae | |
Chen 2019 Ecotoxicol Environ Saf | 2019 | Chen H, Liu G, Qiao N, Kang Z, Hu L, Liao J, Yang F, Pang C, Liu B, Zeng Q, Li Y, Li Y (2019) Toxic effects of arsenic trioxide on spermatogonia are associated with oxidative stress, mitochondrial dysfunction, autophagy and metabolomic alterations. Ecotoxicol Environ Saf 190:110063. | Mouse | Genital |
Chen 2020 Biochim Biophys Acta Mol Basis Dis | 2020 | Chen T, Hill JT, Moore TM, Cheung ECK, Olsen ZE, Piorczynski TB, Marriott TD, Tessem JS, Walton CM, Bikman BT, Hansen JM, Thomson DM (2020) Lack of skeletal muscle liver kinase B1 alters gene expression, mitochondrial content, inflammation and oxidative stress without affecting high-fat diet-induced obesity or insulin resistance. Biochim Biophys Acta Mol Basis Dis 1866:165805. | Mouse | Skeletal muscle |
Chen 2020 Chem Biol Interact | 2020 | Chen HY, Ho YJ, Chou HC, Liao EC, Tsai YT, Wei YS, Lin LH, Lin MW, Wang YS, Ko ML, Chan H (2020) TGF-Ξ²1 signaling protects retinal ganglion cells from oxidative stress via modulation of the HO-1/Nrf2 pathway. Chem Biol Interact 331:109249. | Mouse | Nervous system |
Chen 2020 Mol Genet Genomic Med | 2020 | Chen D, Zhao Q, Xiong J, Lou X, Han Q, Wei X, Xie J, Li X, Zhou H, Shen L, Yang Y, Fang H, Lyu J (2020) Systematic analysis of a mitochondrial disease-causing ND6 mutation in mitochondrial deficiency. Mol Genet Genomic Med 8:e1199. | Human | Lymphocyte |
Chen 2023 Nat Commun | 2023 | Chen M, Zhu JY, Mu WJ, Luo HY, Li Y, Li S, Yan LJ, Li RY, Guo L (2023) Cdo1-Camkk2-AMPK axis confers the protective effects of exercise against NAFLD in mice. https://doi.org/10.1038/s41467-023-44242-7 | Human | Liver |
Cheng 2008 Cell Physiol Biochem | 2008 | Cheng Y, Gu XQ, Bednarczyk P, Wiedemann FR, Haddad GG, Siemen D (2008) Hypoxia increases activity of the BK-channel in the inner mitochondrial membrane and reduces activity of the permeability transition pore. Cell Physiol Biochem 22:127-36. | Rat | Nervous system |
Cheng 2014 Science | 2014 | Cheng SC, Quintin J, Cramer RA, Shepardson KM, Saeed S, Kumar V, Giamarellos-Bourboulis EJ, Martens JH, Rao NA, Aghajanirefah A, Manjeri GR6, Li Y, Ifrim DC, Arts RJ, van der Meer BM, Deen PM, Logie C, O'Neill LA, Willems P, van de Veerdonk FL, van der Meer JW, Ng A, Joosten LA, Wijmenga C, Stunnenberg HG, Xavier RJ, Netea MG (2014) mTOR- and HIF-1 Ξ±βmediated aerobic glycolysis as metabolic basis for trained immunity. Science 345:1250684. | Human | Blood cells Other cell lines |
Cheng 2016 Nat Immunol | 2016 | Cheng SC, Scicluna BP, Arts RJ, Gresnigt MS, Lachmandas E, Giamarellos-Bourboulis EJ, Kox M, Manjeri GR, Wagenaars JA, Cremer OL, Leentjens J, van der Meer AJ, van de Veerdonk FL, Bonten MJ, Schultz MJ, Willems PH, Pickkers P, Joosten LA, van der Poll T, Netea MG (2016) Broad defects in the energy metabolism of leukocytes underlie immunoparalysis in sepsis. Nat Immunol 17:406-13. | Human | Blood cells Lymphocyte |
Cheng 2017 US Patent | 2017 | Cheng WC, Lin GY, Xue YP, Lan CY, Lin F (2017) Method for treating microbial infection. US Patent US20170319654 A1. | Fungi | |
Cheng 2020 Am J Physiol Heart Circ Physiol | 2020 | Cheng TC, Philip JL, Tabima DM, Kumari S, Yakubov B, Frump AL, Hacker TA, Bellofiore A, Li R, Sun X, Goss KN, Lahm T, Chesler N (2020) Estrogen receptor alpha prevents right ventricular diastolic dysfunction and fibrosis in female rats . Am J Physiol Heart Circ Physiol 319:H1459-73. | Rat | Heart |
Cheng 2021 Comp Biochem Physiol B Biochem Mol Biol | 2021 | Cheng H, Munro D, Huynh K, Pamenter ME (2021) Naked mole-rat skeletal muscle mitochondria exhibit minimal functional plasticity in acute or chronic hypoxia. Comp Biochem Physiol B Biochem Mol Biol 255:110596. | Other mammals | Skeletal muscle |
Chennamsetty 2016 Cell Rep | 2016 | Chennamsetty I, Coronado M, Contrepois K, Keller MP, Carcamo-Orive I, Sandin J, Fajardo G, Whittle AJ, Fathzadeh M, Snyder M, Reaven G, Attie AD, Bernstein D, Quertermous T, Knowles JW (2016) Nat1 deficiency is associated with mitochondrial dysfunction and exercise intolerance in mice. Cell Rep 17:527-40. | Mouse | Heart Fat |
Cherix 2022 Mol Psychiatry | 2022 | Cherix A, Poitry-Yamate C, Lanz B, Zanoletti O, Grosse J, Sandi C, Gruetter R, Cardinaux JR (2022) Deletion of Crtc1 leads to hippocampal neuroenergetic impairments associated with depressive-like behavior. https://doi.org/10.1038/s41380-022-01791-5 | Mouse | Nervous system |
Chiba 2019 J Am Soc Nephrol | 2019 | Chiba T, Peasley KD, Cargill KR, Maringer KV, Bharathi SS, Mukherjee E, Zhang Y, Holtz A, Basisty N, Yagobian SD, Schilling B, Goetzman ES, Sims-Lucas S (2019) Sirtuin 5 regulates proximal tubule fatty acid oxidation to protect against AKI. J Am Soc Nephrol 30:2384-98. | Mouse | Kidney |
Chicco 2012 Abstract Bioblast | Chicco AJ (2012) Substrate-specific impairment of cardiac mitochondrial respiration in Taz-deficient mice: Insight into the pathogenesis of Barth Syndrome. Mitochondr Physiol Network 17.12. | Mouse | Heart | |
Chicco 2013 Abstract IOC79 | Chicco AJ (2013) Substrate-specific impairment of oxidative phosphorylation in Tafazzin-deficient cardiac mitochondria: potential role of CoA deficiency. Mitochondr Physiol Network 18.07 | Mouse | Heart | |
Chicco 2013 Abstract MiP2013 | Chicco AJ, Le CH, Schlater A, Kanatous S (2013) Comparative muscle mitochondrial physiology of the northern elephant seal. Mitochondr Physiol Network 18.08. | Human Other mammals | Skeletal muscle | |
Chicco 2013 Abstract MiP2013 Poster | Chicco AJ, Claiborne MS, Le CH, Mulligan CM (2013) Remodeling of skeletal muscle mitochondria in response to exercise training in taz shRNA mouse model of human Barth Syndrome. Mitochondr Physiol Network 18.08. | Mouse | Skeletal muscle | |
Chicco 2014 J Exp Biol | 2014 | Chicco AJ, Le CH, Schlater AE, Nguyen AD, Kaye SD, Beals JW, Scalzo RL, Bell C, Gnaiger E, Costa DP, Crocker DE, Kanatous SB (2014) High fatty acid oxidation capacity and phosphorylation control despite elevated leak and reduced respiratory capacity in northern elephant seal muscle mitochondria. J Exp Biol 217:2947-55. | Human Other mammals | Skeletal muscle |
Chicco 2016a Abstract MitoFit Science Camp 2016 | Oxygen dependence of H2O2 release from skeletal muscle and cardiac mitochondria: influence of sample preparation. | Mouse | Heart Skeletal muscle | |
Chicco 2016b Abstract MitoFit Science Camp 2016 | OXPHOS coupling efficiency of permeabilized muscle fibers predicts metabolic efficiency of subjects exercising at 5260 m. | Human | Skeletal muscle | |
Chicco 2016c Abstract MitoFit Science Camp 2016 | Investigating the mechanism of cardiac mitochondrial respiratory impairment in Barth Syndrome. | Mouse | Heart | |
Chicco 2018 J Biol Chem | 2018 | Chicco AJ, Le CH, Gnaiger E, Dreyer HC, Muyskens JB, D'Alessandro A, Nemkov T, Hocker AD, Prenni JE, Wolfe LM, Sindt NM, Lovering AT, Subudhi AW, Roach RC (2018) Adaptive remodeling of skeletal muscle energy metabolism in high-altitude hypoxia: Lessons from AltitudeOmics. J Biol Chem 293:6659-71. | Human | Skeletal muscle |
Chicco 2018 MiP2018a | Maternal aging increases granulosa cell mitochondrial ROS release and reduces oocyte OXPHOS-linked respiration: implications for embryo development. | Horse | Genital | |
Chicco 2018 MiP2018b | Defective cardiolipin remodeling and cardiac mitochondrial dysfunction: supercomplexes or just complex? | Mouse | Heart | |
Chicco 2018 MiP2018c | Role of mitochondria in skeletal muscle acclimatization to high-altitude. | Human | Skeletal muscle | |
Chicco 2022 MitoFit | 2022 | Chicco AJ, Zilhaver PT, Whitcomb LA, Fresa KJ, Izon CS, Gonzalez-Franquesa A, Izon CS, Dometita C, Irving BA, Garcia-Roves PM (2022) Resolving the Rotenone Paradox: elucidating the complexity of multi-substrate respirometry protocols. https://doi.org/10.26124/mitofit:2022-0017 | ||
Chin 2015 US Patent | 2015 | Chin MT, Chien WM, Dinca A (2015) Modified tafazzin proteins and methods of making and using the same. US Patent US20150203827 A1. | Mouse | Skeletal muscle |
Chin 2017 US Patent | 2017 | Chin MT, Chien WM, Dinca A (2017) Methods for treating and preventing cardiomyopathy. US Patent WO2016094791A1. | Mouse | Heart |
Chinas 2022 Metabolites | 2022 | ChiΓ±as Merlin A, Gonzalez K, Mockler S, Perez Y, Jia UA, Chicco AJ, Ullevig SL, Chung E (2022) Switching to a standard chow diet at weaning improves the effects of maternal and postnatal high-fat and high-sucrose diet on cardiometabolic health in adult male mouse offspring. https://doi.org/10.3390/metabo12060563 | Mouse | Heart |
Chini 2014 Clin Cancer Res | 2014 | Chini CC, Gonzalez Guerrico A, Nin V, Camacho-Pereira J, Escande C, Barbosa M, Chini EN (2014) Targeting of NAD metabolism in pancreatic cancer cells: potential novel therapy for pancreatic tumors. Clin Cancer Res 20:120-30. | Human | Islet cell;pancreas;thymus Other cell lines |